IL_9E0N_080
3D structure
- PDB id
- 9E0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis unmethylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.24 Å
Loop
- Sequence
- UUAA*UGAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E0N_080 not in the Motif Atlas
- Geometric match to IL_5J7L_317
- Geometric discrepancy: 0.1273
- The information below is about IL_5J7L_317
- Detailed Annotation
- UAA/GAN related
- Broad Annotation
- No text annotation
- Motif group
- IL_77691.5
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
9E0N|1|A|U|2081
9E0N|1|A|U|2082
9E0N|1|A|A|2083
9E0N|1|A|A|2084
*
9E0N|1|A|U|2098
9E0N|1|A|G|2099
9E0N|1|A|A|2100
9E0N|1|A|A|2101
9E0N|1|A|G|2102
Current chains
- Chain A
- 23S rRNA
Nearby chains
No other chains within 10ÅColoring options: