IL_9E0N_089

3D structure

PDB id

9E0N (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis unmethylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

UUUGUGUAGGAUAGG*CUCUGA

Length

21 nucleotides

Bulged bases

9E0N|1|A|U|2334, 9E0N|1|A|G|2338, 9E0N|1|A|G|2339, 9E0N|1|A|A|2340, 9E0N|1|A|U|2341, 9E0N|1|A|A|2342, 9E0N|1|A|C|2402, 9E0N|1|A|U|2403

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E0N|1|A|U|2330
9E0N|1|A|U|2331
9E0N|1|A|U|2332
9E0N|1|A|G|2333
9E0N|1|A|U|2334
9E0N|1|A|G|2335
9E0N|1|A|U|2336
9E0N|1|A|A|2337
9E0N|1|A|G|2338
9E0N|1|A|G|2339
9E0N|1|A|A|2340
9E0N|1|A|U|2341
9E0N|1|A|A|2342
9E0N|1|A|G|2343
9E0N|1|A|G|2344
*
9E0N|1|A|C|2400
9E0N|1|A|U|2401
9E0N|1|A|C|2402
9E0N|1|A|U|2403
9E0N|1|A|G|2404
9E0N|1|A|A|2405

Current chains

Chain A

23S rRNA

Nearby chains