IL_9E0N_090

3D structure

PDB id

9E0N (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis unmethylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

GGAG*CGUUGUUGAAAUAC

Length

18 nucleotides

Bulged bases

9E0N|1|A|G|2348, 9E0N|1|A|U|2386, 9E0N|1|A|U|2387, 9E0N|1|A|G|2388, 9E0N|1|A|U|2389, 9E0N|1|A|U|2390, 9E0N|1|A|U|2395

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E0N|1|A|G|2347
9E0N|1|A|G|2348
9E0N|1|A|A|2349
9E0N|1|A|G|2350
*
9E0N|1|A|C|2384
9E0N|1|A|G|2385
9E0N|1|A|U|2386
9E0N|1|A|U|2387
9E0N|1|A|G|2388
9E0N|1|A|U|2389
9E0N|1|A|U|2390
9E0N|1|A|G|2391
9E0N|1|A|A|2392
9E0N|1|A|A|2393
9E0N|1|A|A|2394
9E0N|1|A|U|2395
9E0N|1|A|A|2396
9E0N|1|A|C|2397

Current chains

Chain A

23S rRNA

Nearby chains