IL_9E0N_132

3D structure

PDB id

9E0N (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis unmethylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

UUGU*AG

Length

6 nucleotides

Bulged bases

9E0N|1|a|G|251

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9E0N_132 not in the Motif Atlas

Geometric match to IL_5Y58_001

Geometric discrepancy: 0.2734

The information below is about IL_5Y58_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_45649.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

9E0N|1|a|U|249
9E0N|1|a|U|250
9E0N|1|a|G|251
9E0N|1|a|U|252
*
9E0N|1|a|A|274
9E0N|1|a|G|275

Current chains

Chain a

16S rRNA

Nearby chains

Chain q

Small ribosomal subunit protein uS17