IL_9E0N_150
3D structure
- PDB id
- 9E0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis unmethylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.24 Å
Loop
- Sequence
- GGAAU*GGAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E0N_150 not in the Motif Atlas
- Geometric match to IL_4LFB_065
- Geometric discrepancy: 0.2057
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.1
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
9E0N|1|a|G|653
9E0N|1|a|G|654
9E0N|1|a|A|655
9E0N|1|a|A|656
9E0N|1|a|U|657
*
9E0N|1|a|G|693
9E0N|1|a|G|694
9E0N|1|a|A|695
9E0N|1|a|A|696
9E0N|1|a|C|697
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain C
- Large ribosomal subunit protein uL2
- Chain f
- Small ribosomal subunit protein bS6
- Chain k
- Small ribosomal subunit protein uS11
- Chain r
- Small ribosomal subunit protein bS18B
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