IL_9E0N_159

3D structure

PDB id

9E0N (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis unmethylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

9E0N|1|a|G|908

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9E0N_159 not in the Motif Atlas

Geometric match to IL_4LFB_036

Geometric discrepancy: 0.2003

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

60

Unit IDs

9E0N|1|a|G|907
9E0N|1|a|G|908
9E0N|1|a|G|909
*
9E0N|1|a|U|1373
9E0N|1|a|U|1374

Current chains

Chain a

16S rRNA

Nearby chains

Chain b

Small ribosomal subunit protein uS2