IL_9E0N_162

3D structure

PDB id

9E0N (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis unmethylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

ACAG*CUGU

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9E0N_162 not in the Motif Atlas

Geometric match to IL_1CSL_001

Geometric discrepancy: 0.235

The information below is about IL_1CSL_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_25872.4

Basepair signature

cWW-cWW-cWH-cWW

Number of instances in this motif group

5

Unit IDs

9E0N|1|a|A|982
9E0N|1|a|C|983
9E0N|1|a|A|984
9E0N|1|a|G|985
*
9E0N|1|a|C|1018
9E0N|1|a|U|1019
9E0N|1|a|G|1020
9E0N|1|a|U|1021

Current chains

Chain a

16S rRNA

Nearby chains