IL_9E0N_176
3D structure
- PDB id
- 9E0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis unmethylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.24 Å
Loop
- Sequence
- AAAG*CGAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E0N_176 not in the Motif Atlas
- Geometric match to IL_8P9A_457
- Geometric discrepancy: 0.1387
- The information below is about IL_8P9A_457
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.1
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 44
Unit IDs
9E0N|1|a|A|1399
9E0N|1|a|A|1400
9E0N|1|a|A|1401
9E0N|1|a|G|1402
*
9E0N|1|a|C|1465
9E0N|1|a|G|1466
9E0N|1|a|A|1467
9E0N|1|a|U|1468
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain u
- Conserved domain protein
Coloring options: