IL_9E0P_031
3D structure
- PDB id
- 9E0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis methylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- GCUACU*AAAC
- Length
- 10 nucleotides
- Bulged bases
- 9E0P|1|A|U|981
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E0P_031 not in the Motif Atlas
- Geometric match to IL_7A0S_029
- Geometric discrepancy: 0.211
- The information below is about IL_7A0S_029
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_16301.2
- Basepair signature
- cWW-cWS-tWH-R-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
9E0P|1|A|G|979
9E0P|1|A|C|980
9E0P|1|A|U|981
9E0P|1|A|A|982
9E0P|1|A|C|983
9E0P|1|A|U|984
*
9E0P|1|A|A|1024
9E0P|1|A|A|1025
9E0P|1|A|A|1026
9E0P|1|A|C|1027
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain N
- Large ribosomal subunit protein uL16
Coloring options: