3D structure

PDB id
9E0P (explore in PDB, NAKB, or RNA 3D Hub)
Description
M. smegmatis methylated 70S ribosome structure
Experimental method
ELECTRON MICROSCOPY
Resolution
3.17 Å

Loop

Sequence
CGAAGACAAC*GUCAAG
Length
16 nucleotides
Bulged bases
9E0P|1|A|A|1164
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9E0P|1|A|C|1161
9E0P|1|A|G|1162
9E0P|1|A|A|1163
9E0P|1|A|A|1164
9E0P|1|A|G|1165
9E0P|1|A|A|1166
9E0P|1|A|C|1167
9E0P|1|A|A|1168
9E0P|1|A|A|1169
9E0P|1|A|C|1170
*
9E0P|1|A|G|1225
9E0P|1|A|U|1226
9E0P|1|A|C|1227
9E0P|1|A|A|1228
9E0P|1|A|A|1229
9E0P|1|A|G|1230

Current chains

Chain A
23S rRNA

Nearby chains

Chain 7
50S ribosomal protein L36
Chain G
Large ribosomal subunit protein uL6
Chain I
Large ribosomal subunit protein uL10

Coloring options:

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