IL_9E0P_052
3D structure
- PDB id
- 9E0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis methylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- CUAAG*CGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E0P_052 not in the Motif Atlas
- Geometric match to IL_7A0S_048
- Geometric discrepancy: 0.1231
- The information below is about IL_7A0S_048
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- UAA/GAN
- Motif group
- IL_89021.2
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
9E0P|1|A|C|1466
9E0P|1|A|U|1467
9E0P|1|A|A|1468
9E0P|1|A|A|1469
9E0P|1|A|G|1470
*
9E0P|1|A|C|1491
9E0P|1|A|G|1492
9E0P|1|A|A|1493
9E0P|1|A|U|1494
9E0P|1|A|G|1495
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 5
- Large ribosomal subunit protein bL34
- Chain C
- Large ribosomal subunit protein uL2
Coloring options: