IL_9E0P_091

3D structure

PDB id

9E0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis methylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

UUUGUGUAGGAUAGGUGGGAGA*UCGUUGUUGAAAUACCACUCUGA

Length

45 nucleotides

Bulged bases

9E0P|1|A|U|2334, 9E0P|1|A|G|2335, 9E0P|1|A|G|2338, 9E0P|1|A|U|2341, 9E0P|1|A|U|2386, 9E0P|1|A|G|2388, 9E0P|1|A|U|2390, 9E0P|1|A|U|2395

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E0P|1|A|U|2330
9E0P|1|A|U|2331
9E0P|1|A|U|2332
9E0P|1|A|G|2333
9E0P|1|A|U|2334
9E0P|1|A|G|2335
9E0P|1|A|U|2336
9E0P|1|A|A|2337
9E0P|1|A|G|2338
9E0P|1|A|G|2339
9E0P|1|A|A|2340
9E0P|1|A|U|2341
9E0P|1|A|A|2342
9E0P|1|A|G|2343
9E0P|1|A|G|2344
9E0P|1|A|U|2345
9E0P|1|A|G|2346
9E0P|1|A|G|2347
9E0P|1|A|G|2348
9E0P|1|A|A|2349
9E0P|1|A|G|2350
9E0P|1|A|A|2351
*
9E0P|1|A|U|2383
9E0P|1|A|C|2384
9E0P|1|A|G|2385
9E0P|1|A|U|2386
9E0P|1|A|U|2387
9E0P|1|A|G|2388
9E0P|1|A|U|2389
9E0P|1|A|U|2390
9E0P|1|A|G|2391
9E0P|1|A|A|2392
9E0P|1|A|A|2393
9E0P|1|A|A|2394
9E0P|1|A|U|2395
9E0P|1|A|A|2396
9E0P|1|A|C|2397
9E0P|1|A|C|2398
9E0P|1|A|A|2399
9E0P|1|A|C|2400
9E0P|1|A|U|2401
9E0P|1|A|C|2402
9E0P|1|A|U|2403
9E0P|1|A|G|2404
9E0P|1|A|A|2405

Current chains

Chain A

23S rRNA

Nearby chains