IL_9E0P_170

3D structure

PDB id

9E0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis methylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

UACAAAGG*CUUUCAAAG

Length

17 nucleotides

Bulged bases

9E0P|1|a|U|1266, 9E0P|1|a|U|1267, 9E0P|1|a|C|1268

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E0P|1|a|U|1228
9E0P|1|a|A|1229
9E0P|1|a|C|1230
9E0P|1|a|A|1231
9E0P|1|a|A|1232
9E0P|1|a|A|1233
9E0P|1|a|G|1234
9E0P|1|a|G|1235
*
9E0P|1|a|C|1264
9E0P|1|a|U|1265
9E0P|1|a|U|1266
9E0P|1|a|U|1267
9E0P|1|a|C|1268
9E0P|1|a|A|1269
9E0P|1|a|A|1270
9E0P|1|a|A|1271
9E0P|1|a|G|1272

Current chains

Chain a

16S rRNA

Nearby chains

Chain g

Small ribosomal subunit protein uS7

Chain i

Small ribosomal subunit protein uS9

Chain j

Small ribosomal subunit protein uS10