IL_9E16_039
3D structure
- PDB id
- 9E16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GCUACU*AAAC
- Length
- 10 nucleotides
- Bulged bases
- 9E16|1|I|U|995
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E16_039 not in the Motif Atlas
- Homologous match to IL_7A0S_029
- Geometric discrepancy: 0.1611
- The information below is about IL_7A0S_029
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_16301.3
- Basepair signature
- cWW-cWS-tWH-R-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
9E16|1|I|G|993
9E16|1|I|C|994
9E16|1|I|U|995
9E16|1|I|A|996
9E16|1|I|C|997
9E16|1|I|U|998
*
9E16|1|I|A|1038
9E16|1|I|A|1039
9E16|1|I|A|1040
9E16|1|I|C|1041
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain M
- 50S ribosomal protein L16
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