IL_9E16_041

3D structure

PDB id

9E16 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CCGAUG*UACUGACG

Length

14 nucleotides

Bulged bases

9E16|1|I|A|1025

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E16|1|I|C|1005
9E16|1|I|C|1006
9E16|1|I|G|1007
9E16|1|I|A|1008
9E16|1|I|U|1009
9E16|1|I|G|1010
*
9E16|1|I|U|1024
9E16|1|I|A|1025
9E16|1|I|C|1026
9E16|1|I|U|1027
9E16|1|I|G|1028
9E16|1|I|A|1029
9E16|1|I|C|1030
9E16|1|I|G|1031

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L16

Chain V

50S ribosomal protein L25