IL_9E16_065

3D structure

PDB id

9E16 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGAU*GAG

Length

7 nucleotides

Bulged bases

9E16|1|I|A|1591

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9E16_065 not in the Motif Atlas

Geometric match to IL_4M4O_001

Geometric discrepancy: 0.2981

The information below is about IL_4M4O_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.6

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

241

Unit IDs

9E16|1|I|C|1589
9E16|1|I|G|1590
9E16|1|I|A|1591
9E16|1|I|U|1592
*
9E16|1|I|G|1613
9E16|1|I|A|1614
9E16|1|I|G|1615

Current chains

Chain I

23S ribosomal RNA

Nearby chains