IL_9E16_117
3D structure
- PDB id
- 9E16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAUAAC*GGAAAC
- Length
- 12 nucleotides
- Bulged bases
- 9E16|1|I|A|3003
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E16_117 not in the Motif Atlas
- Homologous match to IL_8B0X_165
- Geometric discrepancy: 0.0755
- The information below is about IL_8B0X_165
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_91079.1
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
9E16|1|I|G|2975
9E16|1|I|A|2976
9E16|1|I|U|2977
9E16|1|I|A|2978
9E16|1|I|A|2979
9E16|1|I|C|2980
*
9E16|1|I|G|3000
9E16|1|I|G|3001
9E16|1|I|A|3002
9E16|1|I|A|3003
9E16|1|I|A|3004
9E16|1|I|C|3005
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
- Chain J
- 50S ribosomal protein L13
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