IL_9E16_123
3D structure
- PDB id
- 9E16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUUAAC*GGG
- Length
- 9 nucleotides
- Bulged bases
- 9E16|1|a|U|51, 9E16|1|a|A|53, 9E16|1|a|A|54
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E16_123 not in the Motif Atlas
- Geometric match to IL_8B0X_003
- Geometric discrepancy: 0.1268
- The information below is about IL_8B0X_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32983.3
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 9
Unit IDs
9E16|1|a|C|50
9E16|1|a|U|51
9E16|1|a|U|52
9E16|1|a|A|53
9E16|1|a|A|54
9E16|1|a|C|55
*
9E16|1|a|G|358
9E16|1|a|G|359
9E16|1|a|G|360
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
Coloring options: