IL_9E16_155
3D structure
- PDB id
- 9E16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGAGUACG*UAAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E16_155 not in the Motif Atlas
- Homologous match to IL_8B0X_037
- Geometric discrepancy: 0.0698
- The information below is about IL_8B0X_037
- Detailed Annotation
- 8x6 Sarcin-Ricin with inserted Y; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_84044.3
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
9E16|1|a|G|880
9E16|1|a|G|881
9E16|1|a|A|882
9E16|1|a|G|883
9E16|1|a|U|884
9E16|1|a|A|885
9E16|1|a|C|886
9E16|1|a|G|887
*
9E16|1|a|U|898
9E16|1|a|A|899
9E16|1|a|A|900
9E16|1|a|A|901
9E16|1|a|A|902
9E16|1|a|C|903
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
- Chain x
- 30S ribosomal protein S22
Coloring options: