IL_9E16_183
3D structure
- PDB id
- 9E16 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UAAC*GGGA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E16_183 not in the Motif Atlas
- Geometric match to IL_9PN5_096
- Geometric discrepancy: 0.13
- The information below is about IL_9PN5_096
- Detailed Annotation
- Tandem non-canonical cWW pairs with external base triple
- Broad Annotation
- Tandem non-canonical cWW pairs with external base triple
- Motif group
- IL_15225.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 38
Unit IDs
9E16|1|a|U|1417
9E16|1|a|A|1418
9E16|1|a|A|1419
9E16|1|a|C|1420
*
9E16|1|a|G|1466
9E16|1|a|G|1467
9E16|1|a|G|1468
9E16|1|a|A|1469
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
- Chain K
- Large ribosomal subunit protein uL14
Coloring options: