IL_9E1S_020
3D structure
- PDB id
- 9E1S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.39 Å
Loop
- Sequence
- GUAC*GAGUGAAAGAGUAC
- Length
- 18 nucleotides
- Bulged bases
- 9E1S|1|I|G|592, 9E1S|1|I|A|596
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E1S_020 not in the Motif Atlas
- Geometric match to IL_8GLP_019
- Geometric discrepancy: 0.0812
- The information below is about IL_8GLP_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44923.3
- Basepair signature
- cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
- Number of instances in this motif group
- 10
Unit IDs
9E1S|1|I|G|570
9E1S|1|I|U|571
9E1S|1|I|A|572
9E1S|1|I|C|573
*
9E1S|1|I|G|584
9E1S|1|I|A|585
9E1S|1|I|G|586
9E1S|1|I|U|587
9E1S|1|I|G|588
9E1S|1|I|A|589
9E1S|1|I|A|590
9E1S|1|I|A|591
9E1S|1|I|G|592
9E1S|1|I|A|593
9E1S|1|I|G|594
9E1S|1|I|U|595
9E1S|1|I|A|596
9E1S|1|I|C|597
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain S
- 50S ribosomal protein L22
- Chain U
- 50S ribosomal protein uL24
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