IL_9E1S_051

3D structure

PDB id

9E1S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

CGCAAAGACAA*UCAAGUG

Length

18 nucleotides

Bulged bases

9E1S|1|I|A|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E1S|1|I|C|1170
9E1S|1|I|G|1171
9E1S|1|I|C|1172
9E1S|1|I|A|1173
9E1S|1|I|A|1174
9E1S|1|I|A|1175
9E1S|1|I|G|1176
9E1S|1|I|A|1177
9E1S|1|I|C|1178
9E1S|1|I|A|1179
9E1S|1|I|A|1180
*
9E1S|1|I|U|1237
9E1S|1|I|C|1238
9E1S|1|I|A|1239
9E1S|1|I|A|1240
9E1S|1|I|G|1241
9E1S|1|I|U|1242
9E1S|1|I|G|1243

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain 4

50S ribosomal protein bL36

Chain G

50S ribosomal protein L6

Chain V

50S ribosomal protein L25