IL_9E1S_072

3D structure

PDB id

9E1S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

CAAG*UGACG

Length

9 nucleotides

Bulged bases

9E1S|1|I|C|1762

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9E1S_072 not in the Motif Atlas

Homologous match to IL_8B0X_118

Geometric discrepancy: 0.1522

The information below is about IL_8B0X_118

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.5

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

9E1S|1|I|C|1706
9E1S|1|I|A|1707
9E1S|1|I|A|1708
9E1S|1|I|G|1709
*
9E1S|1|I|U|1759
9E1S|1|I|G|1760
9E1S|1|I|A|1761
9E1S|1|I|C|1762
9E1S|1|I|G|1763

Current chains

Chain I

23S ribosomal RNA

Nearby chains