IL_9E1S_079
3D structure
- PDB id
- 9E1S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.39 Å
Loop
- Sequence
- GGAACUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E1S_079 not in the Motif Atlas
- Geometric match to IL_8B0X_180
- Geometric discrepancy: 0.0439
- The information below is about IL_8B0X_180
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.3
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 11
Unit IDs
9E1S|1|I|G|1901
9E1S|1|I|G|1902
9E1S|1|I|A|1903
9E1S|1|I|A|1904
9E1S|1|I|C|1905
9E1S|1|I|U|1906
9E1S|1|I|C|1907
9E1S|1|I|G|1908
9E1S|1|I|G|1909
*
9E1S|1|I|C|2228
9E1S|1|I|U|2229
9E1S|1|I|G|2230
9E1S|1|I|U|2231
9E1S|1|I|C|2232
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain K
- Large ribosomal subunit protein uL14
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