IL_9E6Q_009
3D structure
- PDB id
- 9E6Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Pyrobaculum calidifontis 50S ribosomal subunit in complex with Dri
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.95 Å
Loop
- Sequence
- CAAAU*AGAUGUG
- Length
- 12 nucleotides
- Bulged bases
- 9E6Q|1|1|U|284
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65996.1
- Basepair signature
- cWW-L-cWW-L-tSH-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
9E6Q|1|1|C|255
9E6Q|1|1|A|256
9E6Q|1|1|A|257
9E6Q|1|1|A|258
9E6Q|1|1|U|259
*
9E6Q|1|1|A|281
9E6Q|1|1|G|282
9E6Q|1|1|A|283
9E6Q|1|1|U|284
9E6Q|1|1|G|285
9E6Q|1|1|U|286
9E6Q|1|1|G|287
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain AF
- Large ribosomal subunit protein eL8
- Chain AM
- 50S ribosomal protein L15e
Coloring options: