IL_9E6Q_059
3D structure
- PDB id
- 9E6Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Pyrobaculum calidifontis 50S ribosomal subunit in complex with Dri
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.95 Å
Loop
- Sequence
- CGAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9E6Q_059 not in the Motif Atlas
- Geometric match to IL_8VTW_073
- Geometric discrepancy: 0.2893
- The information below is about IL_8VTW_073
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89021.1
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
9E6Q|1|1|C|1621
9E6Q|1|1|G|1622
9E6Q|1|1|A|1623
9E6Q|1|1|A|1624
9E6Q|1|1|G|1625
*
9E6Q|1|1|C|1657
9E6Q|1|1|G|1658
9E6Q|1|1|A|1659
9E6Q|1|1|A|1660
9E6Q|1|1|G|1661
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain Ac
- Large ribosomal subunit protein eL34
- Chain Ak
- PaREP1 domain containing protein
Coloring options: