IL_9EBB_050
3D structure
- PDB id
- 9EBB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CAAAGACAA*UCAAG
- Length
- 14 nucleotides
- Bulged bases
- 9EBB|1|I|A|1175
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9EBB_050 not in the Motif Atlas
- Homologous match to IL_8B0X_104
- Geometric discrepancy: 0.2402
- The information below is about IL_8B0X_104
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.4
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 5
Unit IDs
9EBB|1|I|C|1172
9EBB|1|I|A|1173
9EBB|1|I|A|1174
9EBB|1|I|A|1175
9EBB|1|I|G|1176
9EBB|1|I|A|1177
9EBB|1|I|C|1178
9EBB|1|I|A|1179
9EBB|1|I|A|1180
*
9EBB|1|I|U|1237
9EBB|1|I|C|1238
9EBB|1|I|A|1239
9EBB|1|I|A|1240
9EBB|1|I|G|1241
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
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