IL_9EBB_151
3D structure
- PDB id
- 9EBB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGAAU*GGAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9EBB_151 not in the Motif Atlas
- Homologous match to IL_8B0X_176
- Geometric discrepancy: 0.0782
- The information below is about IL_8B0X_176
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.5
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
9EBB|1|a|G|664
9EBB|1|a|G|665
9EBB|1|a|A|666
9EBB|1|a|A|667
9EBB|1|a|U|668
*
9EBB|1|a|G|704
9EBB|1|a|G|705
9EBB|1|a|A|706
9EBB|1|a|A|707
9EBB|1|a|C|708
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain f
- 30S ribosomal protein S6
- Chain k
- 30S ribosomal protein S11
- Chain r
- Small ribosomal subunit protein bS18
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