IL_9EBB_181
3D structure
- PDB id
- 9EBB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CAC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9EBB_181 not in the Motif Atlas
- Geometric match to IL_4ZC7_003
- Geometric discrepancy: 0.3798
- The information below is about IL_4ZC7_003
- Detailed Annotation
- Decoding loop
- Broad Annotation
- Decoding loop
- Motif group
- IL_29925.3
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
9EBB|1|a|C|1400
9EBB|1|a|A|1401
9EBB|1|a|C|1402
*
9EBB|1|a|G|1484
9EBB|1|a|A|1485
9EBB|1|a|A|1486
9EBB|1|a|G|1487
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain A
- Ribosome hibernation promoting factor
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
- Chain l
- 30S ribosomal protein S12
- Chain x
- Mitochondrial domain of uncharacterized function (DUF1713)
Coloring options: