IL_9EC3_010
3D structure
- PDB id
- 9EC3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.29 Å
Loop
- Sequence
- GGGGAG*CGUGGAUCC
- Length
- 15 nucleotides
- Bulged bases
- 9EC3|1|I|G|101
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9EC3_010 not in the Motif Atlas
- Geometric match to IL_4LFB_031
- Geometric discrepancy: 0.2427
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
9EC3|1|I|G|80
9EC3|1|I|G|81
9EC3|1|I|G|82
9EC3|1|I|G|83
9EC3|1|I|A|84
9EC3|1|I|G|85
*
9EC3|1|I|C|98
9EC3|1|I|G|99
9EC3|1|I|U|100
9EC3|1|I|G|101
9EC3|1|I|G|102
9EC3|1|I|A|103
9EC3|1|I|U|104
9EC3|1|I|C|105
9EC3|1|I|C|106
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain U
- 50S ribosomal protein L24
- Chain Y
- 50S ribosomal protein L29
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