IL_9EC3_044
3D structure
- PDB id
- 9EC3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.29 Å
Loop
- Sequence
- GGGAAAG*CGAUAAUGUAGCGGGGC
- Length
- 24 nucleotides
- Bulged bases
- 9EC3|1|I|U|1256, 9EC3|1|I|U|1259
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9EC3_044 not in the Motif Atlas
- Homologous match to IL_8B0X_101
- Geometric discrepancy: 0.1879
- The information below is about IL_8B0X_101
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50715.4
- Basepair signature
- cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
9EC3|1|I|G|1153
9EC3|1|I|G|1154
9EC3|1|I|G|1155
9EC3|1|I|A|1156
9EC3|1|I|A|1157
9EC3|1|I|A|1158
9EC3|1|I|G|1159
*
9EC3|1|I|C|1253
9EC3|1|I|G|1254
9EC3|1|I|A|1255
9EC3|1|I|U|1256
9EC3|1|I|A|1257
9EC3|1|I|A|1258
9EC3|1|I|U|1259
9EC3|1|I|G|1260
9EC3|1|I|U|1261
9EC3|1|I|A|1262
9EC3|1|I|G|1263
9EC3|1|I|C|1264
9EC3|1|I|G|1265
9EC3|1|I|G|1266
9EC3|1|I|G|1267
9EC3|1|I|G|1268
9EC3|1|I|C|1269
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain D
- 50S ribosomal protein L3
- Chain J
- 50S ribosomal protein L13
- Chain M
- 50S ribosomal protein L16
Coloring options: