IL_9EC3_066

3D structure

PDB id

9EC3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.29 Å

Loop

Sequence

CGGUAG*UGAGAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9EC3_066 not in the Motif Atlas

Geometric match to IL_8GLP_291

Geometric discrepancy: 0.3783

The information below is about IL_8GLP_291

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_46203.1

Basepair signature

cWW-L-R-L-R-L-R-L-R-cWW

Number of instances in this motif group

2

Unit IDs

9EC3|1|I|C|1711
9EC3|1|I|G|1712
9EC3|1|I|G|1713
9EC3|1|I|U|1714
9EC3|1|I|A|1715
9EC3|1|I|G|1716
*
9EC3|1|I|U|1752
9EC3|1|I|G|1753
9EC3|1|I|A|1754
9EC3|1|I|G|1755
9EC3|1|I|A|1756
9EC3|1|I|G|1757

Current chains

Chain I

23S ribosomal RNA

Nearby chains