IL_9EC3_124
3D structure
- PDB id
- 9EC3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.29 Å
Loop
- Sequence
- GGAUAAG*UCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 9EC3|1|a|U|169
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9EC3_124 not in the Motif Atlas
- Homologous match to IL_8B0X_012
- Geometric discrepancy: 0.1539
- The information below is about IL_8B0X_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_24485.3
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 4
Unit IDs
9EC3|1|a|G|143
9EC3|1|a|G|144
9EC3|1|a|A|145
9EC3|1|a|U|146
9EC3|1|a|A|147
9EC3|1|a|A|148
9EC3|1|a|G|149
*
9EC3|1|a|U|164
9EC3|1|a|C|165
9EC3|1|a|U|166
9EC3|1|a|A|167
9EC3|1|a|A|168
9EC3|1|a|U|169
9EC3|1|a|A|170
9EC3|1|a|C|171
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain t
- 30S ribosomal protein S20
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