IL_9EC3_131
3D structure
- PDB id
- 9EC3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.29 Å
Loop
- Sequence
- GGAUGACG*UGUAAAC
- Length
- 15 nucleotides
- Bulged bases
- 9EC3|1|a|A|410, 9EC3|1|a|U|411, 9EC3|1|a|G|412
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9EC3_131 not in the Motif Atlas
- Homologous match to IL_8B0X_019
- Geometric discrepancy: 0.4618
- The information below is about IL_8B0X_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62329.1
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
9EC3|1|a|G|408
9EC3|1|a|G|409
9EC3|1|a|A|410
9EC3|1|a|U|411
9EC3|1|a|G|412
9EC3|1|a|A|413
9EC3|1|a|C|414
9EC3|1|a|G|415
*
9EC3|1|a|U|426
9EC3|1|a|G|427
9EC3|1|a|U|428
9EC3|1|a|A|429
9EC3|1|a|A|430
9EC3|1|a|A|431
9EC3|1|a|C|432
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain d
- 30S ribosomal protein S4
Coloring options: