IL_9ED0_084
3D structure
- PDB id
- 9ED0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human LARP1 bound to the 40S small ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CGAU*AGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9ED0_084 not in the Motif Atlas
- Geometric match to IL_4WF9_087
- Geometric discrepancy: 0.2407
- The information below is about IL_4WF9_087
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.2
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 43
Unit IDs
9ED0|1|2|C|1717
9ED0|1|2|G|1718
9ED0|1|2|A|1719
9ED0|1|2|U|1720
*
9ED0|1|2|A|1813
9ED0|1|2|G|1814
9ED0|1|2|A|1815
9ED0|1|2|G|1816
Current chains
- Chain 2
- rRNA
Nearby chains
- Chain X
- 40S ribosomal protein S23
- Chain n
- Small ribosomal subunit protein eS32
Coloring options: