IL_9EHO_059
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGCCCUAC*GA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EHO|1|5|U|1814
9EHO|1|5|G|1815
9EHO|1|5|C|1816
9EHO|1|5|C|1817
9EHO|1|5|C|1818
9EHO|1|5|U|1819
9EHO|1|5|A|1820
9EHO|1|5|C|1821
*
9EHO|1|5|G|1966
9EHO|1|5|A|1967
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain F
- 60S ribosomal protein L7 isoform X1
- Chain O
- Large ribosomal subunit protein uL13
- Chain S
- 60S ribosomal protein L18a
- Chain f
- Large ribosomal subunit protein eL33
Coloring options: