IL_9EHO_080
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGGAAUC*GGAGAUA
- Length
- 14 nucleotides
- Bulged bases
- 9EHO|1|5|U|2508, 9EHO|1|5|A|2521
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EHO|1|5|U|2503
9EHO|1|5|G|2504
9EHO|1|5|G|2505
9EHO|1|5|A|2506
9EHO|1|5|A|2507
9EHO|1|5|U|2508
9EHO|1|5|C|2509
*
9EHO|1|5|G|2519
9EHO|1|5|G|2520
9EHO|1|5|A|2521
9EHO|1|5|G|2522
9EHO|1|5|A|2523
9EHO|1|5|U|2524
9EHO|1|5|A|2525
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain OO
- Small ribosomal subunit protein uS15
- Chain R
- Ribosomal protein L19
- Chain Z
- Large ribosomal subunit protein eL27
- Chain c
- Large ribosomal subunit protein eL30
- Chain g
- Large ribosomal subunit protein eL34
- Chain p
- Large ribosomal subunit protein eL43
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