IL_9EHO_096
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CCAAAUGCCUCG*CGCG
- Length
- 16 nucleotides
- Bulged bases
- 9EHO|1|5|A|3596, 9EHO|1|5|C|3602, 9EHO|1|5|C|3621
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EHO|1|5|C|3592
9EHO|1|5|C|3593
9EHO|1|5|A|3594
9EHO|1|5|A|3595
9EHO|1|5|A|3596
9EHO|1|5|U|3597
9EHO|1|5|G|3598
9EHO|1|5|C|3599
9EHO|1|5|C|3600
9EHO|1|5|U|3601
9EHO|1|5|C|3602
9EHO|1|5|G|3603
*
9EHO|1|5|C|3619
9EHO|1|5|G|3620
9EHO|1|5|C|3621
9EHO|1|5|G|3622
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain n
- eS32
Coloring options: