3D structure

PDB id
9EHO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Octopus ribosome, hybrid 80S
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
GGAUAAC*GCUAAUAC
Length
15 nucleotides
Bulged bases
9EHO|1|AA|U|178
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9EHO|1|AA|G|151
9EHO|1|AA|G|152
9EHO|1|AA|A|153
9EHO|1|AA|U|154
9EHO|1|AA|A|155
9EHO|1|AA|A|156
9EHO|1|AA|C|157
*
9EHO|1|AA|G|173
9EHO|1|AA|C|174
9EHO|1|AA|U|175
9EHO|1|AA|A|176
9EHO|1|AA|A|177
9EHO|1|AA|U|178
9EHO|1|AA|A|179
9EHO|1|AA|C|180

Current chains

Chain AA
18S rRNA

Nearby chains

Chain HH
Small ribosomal subunit protein eS6
Chain ZZ
40S ribosomal protein S24

Coloring options:

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