IL_9H3G_165

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

9H3G|1|h1|U|168

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_24485.2

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

5

Unit IDs

9H3G|1|h1|G|141
9H3G|1|h1|G|142
9H3G|1|h1|A|143
9H3G|1|h1|U|144
9H3G|1|h1|A|145
9H3G|1|h1|A|146
9H3G|1|h1|C|147
*
9H3G|1|h1|G|163
9H3G|1|h1|C|164
9H3G|1|h1|U|165
9H3G|1|h1|A|166
9H3G|1|h1|A|167
9H3G|1|h1|U|168
9H3G|1|h1|A|169
9H3G|1|h1|C|170

Current chains

Chain h1

Ribosomal RNA 18S

Nearby chains

Chain Ka

Small ribosomal subunit protein eS24y

Chain Ta

Small ribosomal subunit protein eS6y