IL_9EHO_160

3D structure

PDB id

9EHO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Octopus ribosome, hybrid 80S

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAUCAA*UGGCAACG

Length

14 nucleotides

Bulged bases

9EHO|1|AA|U|606, 9EHO|1|AA|C|644

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EHO|1|AA|U|604
9EHO|1|AA|A|605
9EHO|1|AA|U|606
9EHO|1|AA|C|607
9EHO|1|AA|A|608
9EHO|1|AA|A|609
*
9EHO|1|AA|U|641
9EHO|1|AA|G|642
9EHO|1|AA|G|643
9EHO|1|AA|C|644
9EHO|1|AA|A|645
9EHO|1|AA|A|646
9EHO|1|AA|C|647
9EHO|1|AA|G|648

Current chains

Chain AA

18S rRNA

Nearby chains

Chain JJ

40S ribosomal protein S8

Chain MM

40S ribosomal protein S11

Chain YY

Small ribosomal subunit protein uS12