IL_9EHO_176
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGUAG*UCAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EHO|1|AA|C|921
9EHO|1|AA|G|922
9EHO|1|AA|U|923
9EHO|1|AA|A|924
9EHO|1|AA|G|925
*
9EHO|1|AA|U|1643
9EHO|1|AA|C|1644
9EHO|1|AA|A|1645
9EHO|1|AA|A|1646
9EHO|1|AA|G|1647
Current chains
- Chain AA
- 18S rRNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain MM
- 40S ribosomal protein S11
- Chain OO
- Small ribosomal subunit protein uS15
- Chain XX
- 40S ribosomal protein S15a
- Chain YY
- Small ribosomal subunit protein uS12
Coloring options: