IL_9EHO_177
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AC*GAAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9EHO_177 not in the Motif Atlas
- Homologous match to IL_9PN5_178
- Geometric discrepancy: 0.0977
- The information below is about IL_9PN5_178
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73108.4
- Basepair signature
- cWW-cWS-cSH-cWW
- Number of instances in this motif group
- 25
Unit IDs
9EHO|1|AA|A|1411
9EHO|1|AA|C|1412
*
9EHO|1|AA|G|1471
9EHO|1|AA|A|1472
9EHO|1|AA|A|1473
9EHO|1|AA|U|1474
Current chains
- Chain AA
- 18S rRNA
Nearby chains
- Chain II
- 40S ribosomal protein S7
- Chain MM
- 40S ribosomal protein S11
- Chain XX
- 40S ribosomal protein S15a
- Chain YY
- Small ribosomal subunit protein uS12
Coloring options: