IL_9EHO_208

3D structure

PDB id

9EHO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Octopus ribosome, hybrid 80S

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGAUC*GUGAAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EHO|1|AA|G|2510
9EHO|1|AA|G|2511
9EHO|1|AA|G|2512
9EHO|1|AA|A|2513
9EHO|1|AA|U|2514
9EHO|1|AA|C|2515
*
9EHO|1|AA|G|2535
9EHO|1|AA|U|2536
9EHO|1|AA|G|2537
9EHO|1|AA|A|2538
9EHO|1|AA|A|2539
9EHO|1|AA|C|2540

Current chains

Chain AA

18S rRNA

Nearby chains

Chain GG

Ribosomal S5

Chain TT

Small ribosomal subunit protein uS13

Chain UU

40S ribosomal protein S19