IL_9ELR_003
3D structure
- PDB id
- 9ELR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- env2 cobalamin riboswitch aptamer domain in complex with ethynyl-2-naphthalenepropiolate-cobalamin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.2 Å
Loop
- Sequence
- AAAAGCAUAG*CCU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9ELR_003 not in the Motif Atlas
- Geometric match to IL_4FRG_001
- Geometric discrepancy: 0.1852
- The information below is about IL_4FRG_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_88072.1
- Basepair signature
- cWW-L-R-L-cWW-L-L-R-L-R-L
- Number of instances in this motif group
- 1
Unit IDs
9ELR|1|B|A|4
9ELR|1|B|A|5
9ELR|1|B|A|6
9ELR|1|B|A|7
9ELR|1|B|G|8
9ELR|1|B|C|9
9ELR|1|B|A|10
9ELR|1|B|U|11
9ELR|1|B|A|12
9ELR|1|B|G|13
*
9ELR|1|B|C|70
9ELR|1|B|C|71
9ELR|1|B|U|72
Current chains
- Chain B
- RNA (76-MER)
Nearby chains
- Chain A
- RNA (76-MER)
Coloring options: