IL_9F1B_059
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- CGAU*GCAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1B_059 not in the Motif Atlas
- Homologous match to IL_8C3A_444
- Geometric discrepancy: 0.0889
- The information below is about IL_8C3A_444
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_54697.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 51
Unit IDs
9F1B|1|A2|C|1099
9F1B|1|A2|G|1100
9F1B|1|A2|A|1101
9F1B|1|A2|U|1102
*
9F1B|1|A2|G|1132
9F1B|1|A2|C|1133
9F1B|1|A2|A|1134
9F1B|1|A2|G|1135
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AA
- 40S ribosomal protein S27
- Chain AE
- Small ribosomal subunit protein eS26
- Chain AZ
- 40S ribosomal protein SA
- Chain Aa
- 40S ribosomal protein S3a
- Chain Am
- 40S ribosomal protein S13
- Chain Aq
- 40S ribosomal protein eS17
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