IL_9F1B_090
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- G(OMC)CC*GUA(6MZ)C
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMC, 6MZ
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1B_090 not in the Motif Atlas
- Geometric match to IL_4V88_464
- Geometric discrepancy: 0.0969
- The information below is about IL_4V88_464
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65718.1
- Basepair signature
- cWW-cSH-cWS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
9F1B|1|A2|G|1703
9F1B|1|A2|OMC|1704
9F1B|1|A2|C|1705
9F1B|1|A2|C|1706
*
9F1B|1|A2|G|1830
9F1B|1|A2|U|1831
9F1B|1|A2|A|1832
9F1B|1|A2|6MZ|1833
9F1B|1|A2|C|1834
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AH
- mRNA
- Chain AT
- P-site tRNA
- Chain Az
- 60S ribosomal protein L41
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: