IL_9F1B_111
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- CGAA*UG
- Length
- 6 nucleotides
- Bulged bases
- 9F1B|1|B5|G|119
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1B_111 not in the Motif Atlas
- Geometric match to IL_5J7L_268
- Geometric discrepancy: 0.2785
- The information below is about IL_5J7L_268
- Detailed Annotation
- Stack outside cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_56987.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
9F1B|1|B5|C|118
9F1B|1|B5|G|119
9F1B|1|B5|A|120
9F1B|1|B5|A|121
*
9F1B|1|B5|U|152
9F1B|1|B5|G|153
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BG
- 60S ribosomal protein L7a
- Chain BN
- Ribosomal protein L15
- Chain Bh
- 60S ribosomal protein L35
Coloring options: