IL_9F1B_124
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- GGUC*GCUAC
- Length
- 9 nucleotides
- Bulged bases
- 9F1B|1|B5|A|1247
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1B_124 not in the Motif Atlas
- Geometric match to IL_2O3V_003
- Geometric discrepancy: 0.275
- The information below is about IL_2O3V_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_51479.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
9F1B|1|B5|G|443
9F1B|1|B5|G|444
9F1B|1|B5|U|445
9F1B|1|B5|C|446
*
9F1B|1|B5|G|1244
9F1B|1|B5|C|1245
9F1B|1|B5|U|1246
9F1B|1|B5|A|1247
9F1B|1|B5|C|1248
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain B8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain Be
- Ribosomal protein L32
- Chain Bf
- 60S ribosomal protein L35a
Coloring options: