IL_9F1B_178

3D structure

PDB id

9F1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

GAUUAGAG*C(PSU)A(PSU)(PSU)CUC

Length

16 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1B|1|B5|G|1684
9F1B|1|B5|A|1685
9F1B|1|B5|U|1686
9F1B|1|B5|U|1687
9F1B|1|B5|A|1688
9F1B|1|B5|G|1689
9F1B|1|B5|A|1690
9F1B|1|B5|G|1691
*
9F1B|1|B5|C|1717
9F1B|1|B5|PSU|1718
9F1B|1|B5|A|1719
9F1B|1|B5|PSU|1720
9F1B|1|B5|PSU|1721
9F1B|1|B5|C|1722
9F1B|1|B5|U|1723
9F1B|1|B5|C|1724

Current chains

Chain B5

28S rRNA

Nearby chains

Chain B

Large ribosomal subunit protein uL18

Chain B7

5S ribosomal RNA; 5S rRNA

Chain BI

60S ribosomal protein L10